Modeling formalisms in Systems Biology

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Table 2 Modeling formalisms and implemented features

Modeling formalisms and implemented features. (+) Supported feature; (e) Available through extension; (BN) Boolean networks; (Bay) Bayesian networks; (PN) Petri nets; (PA) Process algebras; (CB) Constraint-based models; (DE) Differential equations; (RB) Rule-based models; (ISM) Interacting state machines; (CA) Cellular automata; (AB) Agent-based models.