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Table 1 Primer specifications

From: Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.)

Primer

Target

Sequence (5'-3')

Reference

Pla46 F

Planctomycetales

GGATTAGGCATGCAAGTC

Neef et al. 1998

616 F

Most bacteria

AGAGTTTGATYMTGGCTCAG

Juretschko et al. 1998

EubI R

Most bacteria

GCTGCCTCCCGTAGGAGT

Amann et al. 1990

EubII R

Planctomycetales

GCAGCCACCCGTAGGTGT

Daims et al. 1999

EubIII R

Verrucomicrobiales

GCTGCCACCCGTAGGTGT

Daims et al. 1999