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Table 1 Bacillus megaterium strains used in this study, and GenBank accession numbers for CYP102A1 variants, 16S rRNA, and ITS sequences between 16S-23S sequencesa

From: Characterization of diverse natural variants of CYP102A1 found within a species of Bacillus megaterium

  

Accession Number

Strain

Variant Name b

Genomic DNA

16S rRNA

16S-23S intergenic

KCCM 11745

102A1.1

(J04832)c

FJ917385

FJ969781

IFO 12108

102A1.1

(J04832)c

FJ969756

FJ969774

ATCC 14581

102A1.1

(J04832)c

FJ969751

FJ969767

KCCM 41415

102A1.1

(J04832)c

FJ969762

FJ969792

KCTC 3712

102A1.2

FJ899078

FJ969764

FJ969795

KCCM 12503

102A1.3

FJ899082

FJ969761

FJ969787

ATCC 15451

102A1.4

FJ899085

FJ969753

FJ969768

ATCC 10778

102A1.5

FJ899078

FJ969746

FJ969765

KCCM 11938

102A1.5

FJ899078

FJ969760

FJ969786

KCCM 11761

102A1.5

FJ899078

FJ969757

FJ969783

KCCM 11776

102A1.6

FJ899081

FJ969758

FJ969784

KCCM 11934

102A1.6

FJ899081

FJ969759

FJ969785

ATCC 14945

102A1.7

FJ899084

FJ969749

FJ969766

ATCC 21916

102A1.8

FJ899092

FJ969755

FJ969772

KCTC 2194

102A1.8

FJ859036

FJ969763

FJ969794

ATCC 19213

102A1.9

FJ899091

FJ969754

FJ969769

ATCC 12872

QM B1551d

-e

-e

-e

  1. aGenBank accession numbers (except J04832) were assigned to nucleotide sequences determined in this study. The corresponding CYP102A1 variant gene for each strain is listed.
  2. bThe CYP102A1 variants were named based on the amino acid similarity (Fig. 1a and Table 2).
  3. cPreviously known as the nucleotide sequence of P450 BM3 (CYP102A1) from B. megaterium (Ruettinger et al. 1989).
  4. dGenetic Information regarding the CYP102A1 variant of B. megaterium QM B1551 (ATCC 12872) was obtained from the Whole Genome Sequencing of B. megaterium http://www.bios.niu.edu/b_megaterium/ and the variant was designated as QM B1551. We only used its genetic information to compare to those of other variants and did not study its biochemical and physical properties.
  5. eGenetic information of B. megaterium QM B1551 (ATCC 12872) regarding its CYP102A1 variant, 16S rRNA, and ITS was obtained from the Whole Genome Sequencing of B. megaterium http://www.bios.niu.edu/b_megaterium/. Accession numbers were not provided.