Biosynthesis of polyhydroxyalkanoates containing hydroxyl group from glycolate in Escherichia coli
© Insomphun et al. 2016
Received: 29 March 2016
Accepted: 6 April 2016
Published: 14 April 2016
Polyhydroxyalkanoates (PHAs) containing hydroxyl groups in a side chain were produced in recombinant Escherichia coli JM109 using glycolate as the sole carbon source. The propionate-CoA transferase (pct) gene from Megasphaera elsdenii and the β-ketothiolase (bktB) gene and phaCAB operon from Ralstonia eutropha H16 were introduced into E. coli JM109. A novel monomer containing a hydroxyl group, dihydroxybutyrate (DHBA), was the expected product of the condensation of glycolyl-CoA and acetyl-CoA by BktB. The recombinant strain produced a PHA containing 1 mol% DHBA. The incorporation of DHBA may have been restricted because the expression of phaAB1 competes for acetyl-CoA. The PHA containing DHBA units were evaluated regarding thermal properties, such as melting temperature, glass transition temperature and thermal degradation temperature. The current study demonstrates a potential use of PHA containing hydroxyl groups as renewable resources in biological materials.
KeywordsPolyhydroxyalkanoates Hydroxyl group Escherichia coli Glycolate
Polyhydroxyalkanoates (PHAs), which are one of biodegradable polyesters, are produced intracellularly by a wide variety of microorganisms from carbon and energy storage compounds under unbalanced growth conditions (Doi et al. 1995; Madison and Huisman 1999; Rehm 2007). Because of their biodegradability, biocompatibility, and thermoprocessability, PHAs have attracted much attention for applications in agriculture, medicine, packaging and the food industry (Chen 2009; Numata et al. 2009; Sudesh and Iwata 2008; Verlinden et al. 2007). Poly(3-hydroxybutyrate), P(3HB), is the most abundant PHA in nature. However, the application of P(3HB) is limited by its high crystallinity and brittle nature (Sudesh et al. 2000). A variety of PHAs containing 3-hydroxybutyrate (3HB) and a second monomer, such as 3-hydroxypropionate (3HP), 4-hydroxybutyrate (4HB), 5-hydroxyvalerate (5HV), and 3-hydroxyhexanoate (3HHx), have been produced to improve material properties (Budde et al. 2011; Chuah et al. 2013; Fukui et al. 2009; Saito et al. 1996). The mechanical and thermal properties of PHA relate to its monomer composition, which depends on the type of carbon source used, the available metabolic pathway for PHA biosynthesis, and the substrate specificity of PHA synthase (PhaC) and related enzymes (Lu et al. 2009; Numata et al. 2012; Steinbüchel and Valentin 1995; Yamashita et al. 2006). Among various PHAs, those containing functional groups, such as benzyl, hydroxyl and carboxyl groups, are more attractive because the functional group side chain can improve their physical properties (Hazer and Steinbüchel 2007). Moreover, some reactive functional groups in PHA may be further modified by chemicals to extend their applications.
Materials and methods
Bacterial strains and culture conditions
Bacterial strains and plasmids used in this study
Strain or plasmid
Source or reference
F′ traD36 proA + B + lacI q Δ(lacZ)M15/Δ(lac-proAB) glnV44 e14 − gyrA96 recA1 relA1 endA1 thi hsdR17
pBBR1-MCS2 derivative, phaCAB
(Ushimaru et al. 2014)
pBR322 ori, P trc , lacI q , Ampr
pTrcHis2B derivative, pct
pTrcHis2B derivative, pct, bktB
Construction of plasmids and strains
Sequences of the primers used in this study
The pTrc-pct plasmid was constructed as follows. The pct gene was amplified with pBBR-pct and pct-FwBamHI/pct-RvEcoRI as the template and primer, respectively. The amplified fragment was digested by BamHI and EcoRI and then inserted into the pTrcHis2B vector at the corresponding sites to obtain the pTrc-pct plasmid. A coding region of bktB (H16_A1446, 1540 bp) was amplified by PCR with genomic DNA from R. eutropha H16 and bktB-FwEcoRI/bktB-RvXbaI as the template and primer, respectively. The amplified fragment was digested by EcoRI and XbaI and then inserted into the pTrc-pct vector at the corresponding sites to obtain the pTrc-pct-bktB plasmid.
pBBR-CAB was constructed as previously described (Ushimaru et al. 2014).
PHA production by recombinant E. coli was conducted in LB medium at 37 °C until an OD600 was reached 0.6. Then, PHA production was induced by adding a 1.0 % (w/v) filter-sterilized glucose solution or different concentrations of filter-sterilized solutions of sodium glycolate [0.25, 0.50, 0.75, and 1.0 % (w/v)] and isopropyl β-D-1-thiogalactopyranoside (IPTG) (final concentration of 1 mM), and the bacteria were cultured at 30 °C for 72 h. Then, the cells were harvested, washed three times with distilled water, and lyophilized.
Acetoacetyl-CoA, propionyl-CoA, and citrate synthase (≥100 units/mg protein) were purchased from Sigma Aldrich (Saint Louis, MO, USA). Recombinant E. coli was cultivated in LB medium at 37 °C until an OD600 was reached. IPTG was added to a final concentration of 1 mM, and cells continued to grow at 30 °C overnight. The cells were collected by centrifugation at 7500 rpm for 10 min, washed with 20 mM Tris–HCl buffer, pH 7.4, and resuspended in the same buffer (1 g of wet cell/5 ml buffer). The cells were disrupted by sonication (amplitude = 25, process time = 5 min, pulse on = 10 s, and pulse off = 20 s), and cell debris was removed by centrifugation (12,000 rpm, 4 °C, 10 min) to obtain cell free extract. The activity of Pct was determined in the cell free extract by a spectroscopic assay (Lindenkamp et al. 2013). The 400 μl reaction mixture contained 100 mM Tris–HCl buffer, pH 7.4; 200 mM sodium acetate; 20 mM oxaloacetate; 2 mM propionyl-CoA; 1 mM 5,5′-dithiobis-(2-nitrobenzoic acid) (DTNB); 8 units of citrate synthase; and cell free extract. Absorbance was measured at 412 nm. One unit was defined as the activity necessary to produce 1 μmol of thionitrobenzoic acid (TNB) corresponding to the released free CoA-SH per minute (ε412 = 14,140 M−1 cm−1). β-ketothiolase was assayed in a 400 μl reaction mixture containing 50 mM Tris–HCl buffer, pH 7.4; 0.1 mM acetoacetyl-CoA; 1 mM coenzyme A trilithium salt; 25 mM MgSO4; and cell free extract. The decreased absorbance was measured at 304 nm (Mifune et al. 2010). One unit was defined as the activity necessary to produce 1 μmol of Mg2+-3-ketoacyl-CoA complex per minute (ε304 = 19.5 × 103 M−1 cm−1).
Polymer extraction from cells
The polymer was extracted from the lyophilized cells by stirring the cells in chloroform for 3 days at room temperature. Cell debris was removed by filtration, and the polymer solution was purified by precipitation with tenfold volumes of hexane and methanol (Mifune et al. 2008). The purified polymer was vacuum dried before weighing.
PHA content within the cells was determined by gas chromatography-mass spectrometry (GC/MS) after ethanolysis of the dried cells with ethanol-chloroform-hydrochloric acid at 100 °C for 4 h, as described previously (Findlay and White 1983). Polymer composition was determined by 1H nuclear magnetic resonance (NMR) spectra (VARIAN NMR System 500, Varian, Palo Alto, CA). The 500 MHz 1H NMR spectra were recorded in a CDCl3 solution of PHA (20 mg/ml) at 27 °C.
The molecular weights of the polymers were obtained using gel-permeation chromatography (GPC) and a viscometer (Numata et al. 2005). GPC measurements were performed at 40 °C using a JASCO GPC system (RI2031, PU-2086, AS-202055, CO2056; JASCO, Tokyo, Japan) with a Shodex K-806 M, K802, and K-G column at 40 °C. Chloroform was used as the mobile phase at a flow rate of 0.8 ml/min, and the sample concentration used was approximately 1 mg/ml. The calibration curve used for estimating the molecular weight was generated using polystyrene standards with low polydispersity. The molecular weights of the nine polystyrene standards were 3148843, 1074876, 460595, 156528, 66001, 28517, 10112, 3252, and 1319 g/mol.
To determine the molecular weight by viscometry, viscosity was measured at 30 °C using a capillary glass Ubbelohde (SU 026130-0003, SIBATA) with a thermostat water bath (VB-3T, SIBATA, Saitama, Japan). For measurement, 13 ml of solution was transferred into the Ubbelohde and incubated in the thermostat water bath for 15 min. The flow time of the PHA solution was determined as the mean of three measurements. To obtain intrinsic viscosity, four PHA concentrations were measured. Sample concentrations varied within 100–175 mg of PHA per 100 ml of chloroform. Molecular weights were calculated from the Mark-Houwink-Coon equation.
Differential scanning calorimetry (DSC) data were recorded at temperatures ranging from −50 to 200 °C on a Perkin-Elmer DSC 8500 instrument (Perkin-Elmer, Waltham, MA) equipped with a cooling accessory under a nitrogen flow rate of 20 ml/min. The melt-crystallized films (approximately 3 mg) were encapsulated in aluminum pans and heated to 200 °C at 20 °C/min, according to a previous report (Numata et al. 2004). The melting temperature (T m ) and enthalpy of fusion (ΔH m ) were determined from the DSC endotherms. The glass transition temperature (T m ), which was analyzed based on the DSC curves from the second heating, was taken as the midpoint of the heat capacity change.
The thermal degradation temperature of PHA was determined by thermogravimetric analysis (TGA) using a TGA/DSC2 STARe system (Mettler Toledo, Switzerland). PHA (approximately 3 mg) was encapsulated in aluminum pans and heated from 30 to 400 °C at a heating rate of 20 °C/min under a nitrogen atmosphere.
Construction of the recombinant strain
The PHA biosynthesis pathway in E. coli JM109 was constructed by introducing the plasmid containing the phaCAB operon from R. eutropha H16. DHBA units were generated by co-expressing the propionate-coenzyme A transferase gene (pct) from M. elsdenii and the β-ketothiolase gene (bktB) from R. eutropha H16. The first step of this pathway is the formation of glycolyl-CoA from glycolate by Pct. Glycolyl-CoA is condensed with acetyl-CoA to form 2-Hydroxy-3-ketobutyryl-CoA and 4-Hydroxy-3-ketobutyryl-CoA by BktB (Fig. 1). The two intermediates are reduced to 3,4-dihydroxybutyryl-CoA (3,4-DHBA) and 2,3-dihydroxybutyryl-CoA (2,3-DHBA), respectively, by 3-hydroxybutyryl-CoA dehydrogenase (PhaB1). Finally, 3,4-DHBA and 2,3-DHBA are polymerized with 3-hydroxybutyryl-CoA (3HB-CoA) by PHA synthase1 (PhaC1).
The enzymatic activity of Pct and β-ketothiolase in the recombinant E. coli JM109 was determined by spectroscopic assay to confirm gene expression. Our results showed that the cell-free extract from recombinant E. coli JM109 harboring pBBR-CAB and pTrc-pct-bktB exhibited both Pct and β-ketothiolase activity. The specific activities of Pct and β-ketothiolase were 7.2 and 4.2 U/mg, respectively. The activity of the blank, containing no Pct or β-ketothiolase, was subtracted from each sample as background. These results confirmed that the pct and bktB genes were successfully expressed in E. coli JM109.
Biosynthesis of PHA in recombinant E. coli JM109
Biosynthesis of PHA in recombinant E. coli JM109 using glucose and glycolate as the sole carbon sources
Carbon sources [%(w/v)]
PHA content (wt%)
1.0 % glucose
0.67 ± 0.03
5.5 ± 0.5
0.25 % glycolate
0.31 ± 0.10
0.9 ± 0.3
0.50 % glycolate
0.47 ± 0.01
0.9 ± 0.2
0.75 % glycolate
0.42 ± 0.02
0.7 ± 0.1
1.0 % glycolate
0.39 ± 0.01
0.7 ± 0.03
Characterization of PHA
Figure 2b shows the COSY spectrum. The signal (1) between the methine proton connected to the hydroxyl group of 2,3-DHBA and the oxymethine proton of 2,3-DHBA appeared at δ4.3/2.6 ppm. The coupling (2) between the oxymethine proton of 2,3-DHBA and the methyl protons of 2,3-DHBA was seen at δ2.6/1.3 ppm. The coupling (3) between the oxymethine proton of 3HB and the methylene protons of 3HB was assigned at δ5.3/2.6 ppm, whereas the coupling (4) between the oxymethine proton of 3HB and the methyl protons of 3HB appeared at δ5.3/1.3 ppm. The coupling (5) between the methylene protons of 3HV and the methyl protons of 3HV was seen at δ1.6/0.9 ppm.
It has been reported that the molecular weight of PHA can be affected by PHA synthase activity, the type and concentration of carbon source (Sim et al. 1997; Taidi et al. 1994). The recombinant E. coli JM109 produced a polymer with a number-average molecular weight (M n ) of 0.5 × 106 g/mol and polydispersity index (PDI) of 3.2 from glycolate.
Thermal degradation temperatures of PHA samples
T 1 % (°C)
T 5 % (°C)
T 10 % (°C)
P(3HB-co-1 mol% 3HV-co-1 mol%-2,3-DHBA)
PHAs have attracted attention as an alternative to petroleum-based plastic because of their reproducibility from renewable resources. PHAs also show potential in a wide range of applications due to their biodegradability, biocompatibility, and thermoprocessability. To extend their properties and applications, PHAs containing functional groups have been synthesized using several types of microorganisms. Pseudomonas species have been reported to biosynthesize medium-chain-length PHAs containing various functional groups at the terminal position in the presence of carbon sources containing these functional groups (Kim et al. 2000; Lenz et al. 1992). In addition, PHAs with pendant functional groups have been obtained by chemical modification of PHA with unsaturated side chains (Hany et al. 2004; Park et al. 1998). Recently, dihydroxybutyrates (DHBAs) have been produced in E. coli expressing the pct, phaB, and tesB genes grown on glucose supplemented with glycolate (Martin et al. 2013). The chemical structure of DHBA is similar to 3HB, which is the most abundant component of PHA in nature, with an additional hydroxyl group. Therefore, modifying a pathway for the biosynthesis of PHA containing DHBA monomers may be useful for producing a novel PHA with pendant hydroxyl groups.
In this study, an artificial pathway for the generation of DHBA-CoA from glycolate was constructed by introducing pct from M. elsdenii and bktB from R. eutropha H16 into E. coli JM109. The phaCAB operon from R. eutropha H16 was also introduced to generate the PHA biosynthesis pathway. Then, PHA biosynthesis was conducted using glycolate as the sole carbon source. Based on the current results, the PHA content was relatively low (<1 wt%) compared with the samples using glucose as a carbon source (5.5 wt%). In PHA biosynthesis pathway, provision of hydroxyalkanoate monomers is supplied in the cells via metabolism of carbon sources. The type of carbon source used for cultivation effects on PHA production. Therefore, the low PHA content was likely due to the pathway for supplying PHA biosynthesis competes for glycolate metabolism (Hansen and Hayashi 1962). NMR analyses revealed that a small fraction of 2,3-DHBA (1 mol%) was incorporated into PHA. In a previous report, the recombinant strains has been found to produce both 3,4-DHBA and 2,3-DHBA in similar ratios (Martin et al. 2013). This report indicates that 3,4-DHBA-CoA is not a favorable substrate for PHA synthase compared with 2,3-DHBA. The low composition of DHBA was likely due to high metabolic flux of (R)-3HB-CoA, the most preferred substrate for PHA synthase, owing to the expression of the R. eutropha phaAB1 genes. It has been reported that efficient PHA production can be achieved by enhancing metabolic flux to supply intermediates sufficient for PHA biosynthesis and by expressing PHA synthase that has high substrate specificity toward the desired monomer (Fukui et al. 1999; Park et al. 2012). We therefore developed strategies for supplying more DHBA monomers from glycolate and improving substrate specificity toward DHBA-CoA. It is possible to decrease the carbon flux from glycolate to acetyl-CoA by disrupting the glycolate oxidase gene, which catalyzes the first reaction, in which glycolate is converted to glyoxylate. Furthermore, the application of another PHA synthase may improve the incorporation of DHBA monomers into PHA. These strategies will be investigated in the future.
The number-average molecular weight (M n ) of the polymer in the present study was lower than that synthesized by recombinant E. coli TOP10 using glucose (M n = 2.5 × 106 g/mol and PDI = 1.6) (Ushimaru et al. 2014). The decrease in molecular weight and broader molecular weight distribution may be due to interference with the polymerization reaction of PHA synthase by the incorporation of 3HV and 2,3-DHBA monomers into PHA. In addition, the unusual carbon source also resulted in a decreased polymer molecular weight.
The melting and glass transition temperatures of the polymer did not significantly differ from those of P(3HB), even with the low composition of the DHBA monomer units. Both of these thermal decomposition processes depended on the monomer composition. Our results indicated that the thermal decomposition temperature of P(3HB-co-1 mol% 3HV-co-1 mol%-2,3-DHBA) was higher than that of P(3HB) (Table 5); hence, incorporation of 2,3-DHBA affects the thermal degradation process of PHA. However, Lee et al. have reported that high contents of hydroxyl groups reduces the thermal stability of PHA (Lee et al. 2001). The hydroxyl groups are able to react with the ester linkages in the main chain, resulting in molecular weight loss and volatilization. Therefore, the appropriate DHBA composition in PHA should be adjusted for the practical application of this polymer.
In conclusion, this is the first report of the microbial production of P(3HB-co-3HV-co-2,3-DHBA) from glycolate. We constructed an artificial pathway that generated DHBA-CoA by introducing the pct gene from M. elsdenii and the bktB gene from R. eutropha H16 into E. coli JM109. The PHA production was approximately 1 wt% of the dry cell weight, and the DHBA composition was approximately 1 mol%. Further metabolic engineering to supply more DHBA monomers and improve PHA production will be developed in future studies. The thermal properties of PHAs containing DHBA were also characterized, thus providing valuable information for designing new types of PHAs. This study provides new insights into synthesizing PHA containing hydroxyl groups from renewable resources via designed metabolic pathways.
We thank Dr. Kenjiro Yazawa for his help with thermal analysis.
This article does not contain any studies with human participants or animals performed by any of the authors.
The authors declare that they have no competing interests.
This study was financially supported by RIKEN Biomass Engineering Program.
Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
- Budde CF, Riedel SL, Willis LB, Rha C, Sinskey AJ. Production of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) from plant oil by engineered Ralstonia eutropha strains. Appl Environ Microbiol. 2011;77:2847–54.View ArticlePubMedPubMed CentralGoogle Scholar
- Chen GQ. A microbial polyhydroxyalkanoates (PHA) based bio- and materials industry. Chem Soc Rev. 2009;38:2434–46.View ArticlePubMedGoogle Scholar
- Chuah J-A, Yamada M, Taguchi S, Sudesh K, Doi Y, Numata K. Biosynthesis and characterization of polyhydroxyalkanoate containing 5-hydroxyvalerate units: effects of 5HV units on biodegradability, cytotoxicity, mechanical and thermal properties. Poly Degrad Stab. 2013;98:331–8.View ArticleGoogle Scholar
- Doi Y, Kitamura S, Abe H. Microbial synthesis and characterization of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate). Macromolecules. 1995;28:4822–8.View ArticleGoogle Scholar
- Findlay RH. White DC polymeric beta-hydroxyalkanoates from environmental samples and Bacillus megaterium. Appl Environ Microbiol. 1983;45:71–8.PubMedPubMed CentralGoogle Scholar
- Fukui T, Suzuki M, Tsuge T, Nakamura S. Microbial synthesis of poly((R)-3-hydroxybutyrate-co-3-hydroxypropionate) from unrelated carbon sources by engineered Cupriavidus necator. Biomacromolecules. 2009;10:700–6.View ArticlePubMedGoogle Scholar
- Fukui T, Yokomizo S, Kobayashi G, Doi Y. Co-expression of polyhydroxyalkanoate synthase and (R)-enoyl-CoA hydratase genes of Aeromonas caviae establishes copolyester biosynthesis pathway in Escherichia coli. FEMS Microbiol Lett. 1999;170:69–75.View ArticlePubMedGoogle Scholar
- Hansen RW, Hayashi JA. Glycolate metabolism in Escherichia coli. J Bacteriol. 1962;83:679–87.PubMedPubMed CentralGoogle Scholar
- Hany R, Böhlen C, Geiger T, Hartmann R, Kawada J, Schmid M, Zinn M, Marchessault RH. Chemical synthesis of crystalline comb polymers from olefinic medium-chain-length poly[3-hydroxyalkanoates]. Macromolecules. 2004;37:385–9.View ArticleGoogle Scholar
- Hazer B, Steinbüchel A. Increased diversification of polyhydroxyalkanoates by modification reactions for industrial and medical applications. Appl Microbiol Biotechnol. 2007;74:1–12.View ArticlePubMedGoogle Scholar
- Kim DY, Kim YB, Rhee YH. Evaluation of various carbon substrates for the biosynthesis of polyhydroxyalkanoates bearing functional groups by Pseudomonas putida. Int J Biol Macromol. 2000;28:23–9.View ArticlePubMedGoogle Scholar
- Lee MY, Lee TS, Park WH. Effect of side chains on the thermal degradation of poly(3-hydroxyalkanoates). Macromol Chem Physic. 2001;202:1257–61.View ArticleGoogle Scholar
- Lee MY, Park WH, Lenz RW. Hydrophilic bacterial polyesters modified with pendant hydroxyl groups. Polymer. 2000;41:1703–9.View ArticleGoogle Scholar
- Lee W-H, Loo C-Y, Nomura CT, Sudesh K. Biosynthesis of polyhydroxyalkanoate copolymers from mixtures of plant oils and 3-hydroxyvalerate precursors. Bioresour Tech. 2008;99:6844–51.View ArticleGoogle Scholar
- Lenz RW, Kim YB, Fuller RC. Production of unusual bacterial polyesters by Pseudomonas oleovorans through cometabolism. FEMS Microbiol Lett. 1992;103:207–14.View ArticleGoogle Scholar
- Lindenkamp N, Schürmann M, Steinbüchel A. A propionate CoA-transferase of Ralstonia eutropha H16 with broad substrate specificity catalyzing the CoA thioester formation of various carboxylic acids. Appl Microbiol Biotechnol. 2013;97:7699–709.View ArticlePubMedGoogle Scholar
- Lu JN, Tappel RC, Nomura CT. Mini-review: biosynthesis of poly(hydroxyalkanoates). Polym Rev. 2009;49:226–48.View ArticleGoogle Scholar
- Madison LL, Huisman GW. Metabolic engineering of poly(3-hydroxyalkanoates): from DNA to plastic. Microbiol Mol Biol Rev. 1999;63:21–53.PubMedPubMed CentralGoogle Scholar
- Martin CH, Dhamankar H, Tseng HC, Sheppard MJ, Reisch CR, Prather KL. A platform pathway for production of 3-hydroxyacids provides a biosynthetic route to 3-hydroxy-gamma-butyrolactone. Nat Commun. 2013;4:1414.View ArticlePubMedGoogle Scholar
- Mifune J, Nakamura S, Fukui T. Targeted engineering of Cupriavidus necator chromosome for biosynthesis of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) from vegetable oil. Can J Chem. 2008;86:621–7.View ArticleGoogle Scholar
- Mifune J, Nakamura S, Fukui T. Engineering of pha operon on Cupriavidus necator chromosome for efficient biosynthesis of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) from vegetable oil. Polym Degrad Stab. 2010;95:1305–12.View ArticleGoogle Scholar
- Numata K, Abe H, Iwata T. Biodegradability of poly(hydroxyalkanoate) materials. Materials. 2009;2:1104–26.View ArticleGoogle Scholar
- Numata K, Hirota T, Kikkawa Y, Tsuge T, Iwata T, Abe H, Doi Y. Enzymatic degradation processes of lamellar crystals in thin films for poly[(R)-3-hydroxybutyric acid] and its copolymers revealed by real-time atomic force microscopy. Biomacromolecules. 2004;5:2186–94.View ArticlePubMedGoogle Scholar
- Numata K, Kikkawa Y, Tsuge T, Iwata T, Doi Y, Abe H. Enzymatic degradation processes of poly[(R)-3-hydroxybutyric acid] and poly[(R)-3-hydroxybutyric acid-co-(R)-3-hydroxyvaleric acid] single crystals revealed by atomic force microscopy: effects of molecular weight and second-monomer composition on erosion rates. Biomacromolecules. 2005;6:2008–16.View ArticlePubMedGoogle Scholar
- Numata K, Motoda Y, Watanabe S, Tochio N, Kigawa T, Doi Y. Active intermediates of polyhydroxyalkanoate synthase from Aeromonas caviae in polymerization reaction. Biomacromolecules. 2012;13:3450–5.View ArticlePubMedGoogle Scholar
- Park S, Lee T, Lim S-C, Kim T, Lee H, Kim M, Lee S, Song B, Lee S. Biosynthesis of polyhydroxyalkanoates containing 2-hydroxybutyrate from unrelated carbon source by metabolically engineered Escherichia coli. Appl Microbiol Biotechnol. 2012;93:273–83.View ArticlePubMedGoogle Scholar
- Park WH, Lenz RW, Goodwin S. Epoxidation of bacterial polyesters with unsaturated side chains. I. production and epoxidation of polyesters from 10-undecenoic acid. Macromolecules. 1998;31:1480–6.View ArticleGoogle Scholar
- Rehm BH. Biogenesis of microbial polyhydroxyalkanoate granules: a platform technology for the production of tailor-made bioparticles. Curr Issues Mol Biol. 2007;9:41–62.PubMedGoogle Scholar
- Renard E, Poux A, Timbart L, Langlois V, Guérin P. Preparation of a novel artificial bacterial polyester modified with pendant hydroxyl groups. Biomacromolecules. 2005;6:891–6.View ArticlePubMedGoogle Scholar
- Saito Y, Nakamura S, Hiramitsu M, Doi Y. Microbial synthesis and properties of poly(3-hydroxybutyrate-co-4-hydroxybutyrate). Polym Int. 1996;39:169–74.View ArticleGoogle Scholar
- Sambrook J, Russell DW. Molecular cloning: Q laboratory manual. 3rd ed. New York: Cold Spring Harbor Laboratory; 2001.Google Scholar
- Shimamura E, Scandola M, Doi Y. Microbial Synthesis and Characterization of Poly(3-hydroxybutyrate-co-3-hydroxypropionate). Macromolecules. 1994;27:4429–35.View ArticleGoogle Scholar
- Sim SJ, Snell KD, Hogan SA, Stubbe J, Rha C, Sinskey AJ. PHA synthase activity controls the molecular weight and polydispersity of polyhydroxybutyrate in vivo. Nat Biotech. 1997;15:63–7.View ArticleGoogle Scholar
- Steinbüchel A, Valentin HE. Diversity of bacterial polyhydroxyalkanoic acids. FEMS Microbiol Lett. 1995;128:219–28.View ArticleGoogle Scholar
- Sudesh K, Abe H, Doi Y. Synthesis, structure and properties of polyhydroxyalkanoates: biological polyesters. Prog Polym Sci. 2000;25:1503–55.View ArticleGoogle Scholar
- Sudesh K, Iwata T. Sustainability of biobased and biodegradable plastics. CLEAN Soil Air Water. 2008;36:433–42.View ArticleGoogle Scholar
- Taidi B, Anderson A, Dawes E, Byrom D. Effect of carbon source and concentration on the molecular mass of poly(3-hydroxybutyrate) produced by Methylobacterium extorquens and Alcaligenes eutrophus. Appl Microbiol Biotechnol. 1994;40:786–90.View ArticleGoogle Scholar
- Ushimaru K, Motoda Y, Numata K, Tsuge T. Phasin proteins activate Aeromonas caviae polyhydroxyalkanoate (PHA) synthase but not Ralstonia eutropha PHA synthase. Appl Environ Microbiol. 2014;80:2867–73.View ArticlePubMedPubMed CentralGoogle Scholar
- Verlinden RAJ, Hill DJ, Kenward MA, Williams CD, Radecka I. Bacterial synthesis of biodegradable polyhydroxyalkanoates. J Appl Microbiol. 2007;102:1437–49.View ArticlePubMedGoogle Scholar
- Yamashita K, Yamada M, Numata K, Taguchi S. Nonspecific hydrophobic interactions of a repressor protein, PhaR, with poly[(R)-3-hydroxybutyrate] film studied with a quartz crystal microbalance. Biomacromolecules. 2006;7:2449–54.View ArticlePubMedGoogle Scholar